WormBase Tree Display for Variation: WBVar01446575
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WBVar01446575 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01446575 | ||||
Other_name | R151.9.1:c.417G>A | |||||
CE00827:p.Gln139= | ||||||
HGVSg | CHROMOSOME_III:g.7198324C>T | |||||
Sequence_details | SMap | S_parent | Sequence | R151 | ||
Flanking_sequences | CATCGTGGCGAGTTGAGACTGAACCTTGGT | TGGAATGCGTCCGAAATATAGGCCCGAGTT | ||||
Mapping_target | R151 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005835 | From_analysis | WGS_Andersen | |||
WBStrain00022928 | From_analysis | WGS_Andersen | ||||
WBStrain00022930 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00023150 | From_analysis | WGS_Andersen | ||||
WBStrain00023180 | From_analysis | WGS_Andersen | ||||
WBStrain00023211 | From_analysis | WGS_Andersen | ||||
WBStrain00023279 | From_analysis | WGS_Andersen | ||||
WBStrain00023665 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193333313 | ||
dbSNP_ss | ss | 295509232 | ||||
Status | Live | |||||
Affects | Gene | WBGene00020112 | ||||
Transcript | R151.9.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | R151.9.1:c.417G>A | |||||
HGVSp | CE00827:p.Gln139= | |||||
cDNA_position | 418 | |||||
CDS_position | 417 | |||||
Protein_position | 139 | |||||
Exon_number | 5/6 | |||||
Codon_change | caG/caA | |||||
Amino_acid_change | Q | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |