WormBase Tree Display for Variation: WBVar01446052
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WBVar01446052 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01446052 | ||||
Other_name | Y42G9A.6d.1:c.343-1447C>A | |||||
Y42G9A.6e.1:c.343-1447C>A | ||||||
Y42G9A.6c.1:c.382-1447C>A | ||||||
Y42G9A.6a.1:c.382-1447C>A | ||||||
Y42G9A.6g.1:c.292-1447C>A | ||||||
Y42G9A.6f.1:c.292-1447C>A | ||||||
HGVSg | CHROMOSOME_III:g.6145798G>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y42G9A | ||
Flanking_sequences | ATAATTTTTTAAAGTTCTTTGAGTGAGTCC | ATTGGAAATAATTAAAAGTACTAGTAGTAC | ||||
Mapping_target | Y42G9A | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004600 | From_analysis | WGS_Andersen | |||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193332955 | ||
dbSNP_ss | ss | 295508874 | ||||
Status | Live | |||||
Affects | Gene | WBGene00021535 | ||||
Transcript | Y42G9A.6g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6g.1:c.292-1447C>A | |||||
Intron_number | 3/9 | |||||
Y42G9A.6f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6f.1:c.292-1447C>A | |||||
Intron_number | 3/10 | |||||
Y42G9A.6c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6c.1:c.382-1447C>A | |||||
Intron_number | 5/12 | |||||
Y42G9A.6a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6a.1:c.382-1447C>A | |||||
Intron_number | 5/12 | |||||
Y42G9A.6d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6d.1:c.343-1447C>A | |||||
Intron_number | 4/10 | |||||
Y42G9A.6e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y42G9A.6e.1:c.343-1447C>A | |||||
Intron_number | 4/10 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |