WormBase Tree Display for Variation: WBVar01443033
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WBVar01443033 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01443033 | ||||
Other_name | cewivar00468665 | |||||
W07B3.3:n.101+822G>C | ||||||
W07B3.2d.1:c.-28+1519C>G | ||||||
W07B3.2c.2:c.-28+1519C>G | ||||||
W07B3.2b.2:c.-28+1519C>G | ||||||
W07B3.2a.2:c.-28+1519C>G | ||||||
HGVSg | CHROMOSOME_III:g.353144G>C | |||||
Sequence_details | SMap | S_parent | Sequence | W07B3 | ||
Flanking_sequences | TGCTGGTGAGATATTTCATCACACGTTGTT | TCACTTATTAATTATACTAATGGAGAGGTA | ||||
Mapping_target | W07B3 | |||||
Type_of_mutation | Substitution | g | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00027653 | From_analysis | WGS_Andersen | ||||
WBStrain00027656 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193330194 | ||
dbSNP_ss | ss | 295506113 | ||||
Status | Live | |||||
Affects | Gene | WBGene00001561 | ||||
WBGene00219745 | ||||||
Transcript | W07B3.3 | VEP_consequence | intron_variant,non_coding_transcript_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | W07B3.3:n.101+822G>C | |||||
Intron_number | 1/1 | |||||
W07B3.2b.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | W07B3.2b.2:c.-28+1519C>G | |||||
Intron_number | 1/11 | |||||
W07B3.2c.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | W07B3.2c.2:c.-28+1519C>G | |||||
Intron_number | 1/10 | |||||
W07B3.2a.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | W07B3.2a.2:c.-28+1519C>G | |||||
Intron_number | 1/10 | |||||
W07B3.2d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | W07B3.2d.1:c.-28+1519C>G | |||||
Intron_number | 1/10 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |