WormBase Tree Display for Variation: WBVar01438188

WBVar01438188 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01438188
    Other_name: T28D9.3d.1:c.164-169T>A
      T28D9.3b.2:c.116-169T>A
      T28D9.3b.1:c.116-169T>A
      T28D9.3d.2:c.164-169T>A
    HGVSg: CHROMOSOME_II:g.6487387T>A
  Sequence_details: SMap: S_parent: Sequence: T28D9
    Flanking_sequences: CCTCAAAGGTACGTGGGAGAAATGTACACG ATTGGCGATATAATACTTTTCAACTTTCTC
    Mapping_target: T28D9
    Type_of_mutation: Substitution: t a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193326249
        dbSNP_ss ss 295502168
    Status: Live
  Affects: Gene: WBGene00020895
    Transcript: T28D9.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28D9.3b.1:c.116-169T>A
        Intron_number: 3/10
      T28D9.3d.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28D9.3d.2:c.164-169T>A
        Intron_number: 3/10
      T28D9.3b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28D9.3b.2:c.116-169T>A
        Intron_number: 3/10
      T28D9.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28D9.3d.1:c.164-169T>A
        Intron_number: 4/11
  Reference: WBPaper00040707
  Method: WGS_Andersen