WormBase Tree Display for Variation: WBVar01436361
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WBVar01436361 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01436361 | ||||
Other_name | cewivar00278606 | |||||
CE47819:p.Ile344= | ||||||
F54A3.4.1:c.1032C>T | ||||||
HGVSg | CHROMOSOME_II:g.2221824G>A | |||||
Sequence_details | SMap | S_parent | Sequence | F54A3 | ||
Flanking_sequences | GTGCTGAAGCTTCACCAGTGGCGTCTTGCC | ATCGCATCGAGGACTGAGTCGAGAACCAGT | ||||
Mapping_target | F54A3 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00006623 | From_analysis | WGS_Andersen | ||||
WBStrain00006624 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193324422 | ||
dbSNP_ss | ss | 295500341 | ||||
Status | Live | |||||
Affects | Gene | WBGene00018783 | ||||
Transcript | F54A3.4.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F54A3.4.1:c.1032C>T | |||||
HGVSp | CE47819:p.Ile344= | |||||
cDNA_position | 1059 | |||||
CDS_position | 1032 | |||||
Protein_position | 344 | |||||
Exon_number | 5/9 | |||||
Codon_change | atC/atT | |||||
Amino_acid_change | I | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |