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WormBase Tree Display for Variation: WBVar01435889

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Name Class

WBVar01435889EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01435889
Other_namecewivar00080083
F56D12.1d.1:c.285G>C
CE33403:p.Ser235=
F56D12.1a.2:c.705G>C
F56D12.1b.1:c.705G>C
CE29047:p.Ser235=
CE40074:p.Ser95=
F56D12.1a.1:c.705G>C
CE37118:p.Ser235=
F56D12.1c.1:c.705G>C
HGVSgCHROMOSOME_II:g.1307989C>G
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesGATTATATAATTGGAGAGCACGGCGGTGTTGATGGCTTCCAGAGGGAGACGTTACCCTGA
Mapping_targetF56D12
Type_of_mutationSubstitutioncg
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (45)
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193323951
dbSNP_ssss295499869
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1b.1:c.705G>C
HGVSpCE33403:p.Ser235=
cDNA_position707
CDS_position705
Protein_position235
Exon_number6/8
Codon_changetcG/tcC
Amino_acid_changeS
F56D12.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.2:c.705G>C
HGVSpCE29047:p.Ser235=
cDNA_position804
CDS_position705
Protein_position235
Exon_number7/10
Codon_changetcG/tcC
Amino_acid_changeS
F56D12.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.1:c.705G>C
HGVSpCE29047:p.Ser235=
cDNA_position708
CDS_position705
Protein_position235
Exon_number6/9
Codon_changetcG/tcC
Amino_acid_changeS
F56D12.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1d.1:c.285G>C
HGVSpCE40074:p.Ser95=
cDNA_position285
CDS_position285
Protein_position95
Exon_number2/4
Codon_changetcG/tcC
Amino_acid_changeS
F56D12.1c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1c.1:c.705G>C
HGVSpCE37118:p.Ser235=
cDNA_position705
CDS_position705
Protein_position235
Exon_number5/6
Codon_changetcG/tcC
Amino_acid_changeS
ReferenceWBPaper00040707
MethodWGS_Andersen