WormBase Tree Display for Variation: WBVar01435565
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| WBVar01435565 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01435565 | ||||
| Other_name | cewivar00303226 | |||||
| C08G5.4b.1:c.45C>T | ||||||
| C08G5.4a.1:c.521-492C>T | ||||||
| CE46215:p.Gly15= | ||||||
| HGVSg | CHROMOSOME_II:g.747253G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | C08G5 | ||
| Flanking_sequences | TGCTCGGGGAGACCCGCACCCCGGCACACC | CCCCGATGACGTCTGGTAGGGGAGAGCAGG | ||||
| Mapping_target | C08G5 | |||||
| Type_of_mutation | Substitution | g | a | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00005305 | From_analysis | WGS_Andersen | |||
| WBStrain00005315 | From_analysis | WGS_Andersen | ||||
| WBStrain00005834 | From_analysis | WGS_Andersen | ||||
| WBStrain00006616 | From_analysis | WGS_Andersen | ||||
| WBStrain00006618 | From_analysis | WGS_Andersen | ||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00023065 | From_analysis | WGS_Andersen | ||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00027664 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | Million_mutation_project_reanalysis | |||||
| WGS_Andersen | ||||||
| DB_info | Database | dbSNP_rs | rs | 193323627 | ||
| dbSNP_ss | ss | 295499545 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00004926 | ||||
| Transcript | C08G5.4b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | C08G5.4b.1:c.45C>T | |||||
| HGVSp | CE46215:p.Gly15= | |||||
| cDNA_position | 57 | |||||
| CDS_position | 45 | |||||
| Protein_position | 15 | |||||
| Exon_number | 2/6 | |||||
| Codon_change | ggC/ggT | |||||
| Amino_acid_change | G | |||||
| C08G5.4a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C08G5.4a.1:c.521-492C>T | |||||
| Intron_number | 5/8 | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
