WormBase Tree Display for Variation: WBVar01432240
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WBVar01432240 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name (3) | ||||||
Sequence_details | SMap | S_parent | Sequence | K04G2 | ||
Flanking_sequences | TGTATCATACAATGATATTCCAGCTTCTCC | ACAATGTGTGCTCAGGTGTTCAATTTACCT | ||||
Mapping_target | K04G2 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193320303 | ||
dbSNP_ss | ss | 295496220 | ||||
Status | Live | |||||
Affects | Gene | WBGene00000156 | ||||
Transcript | K04G2.8c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | K04G2.8c.1:c.1971A>G | |||||
HGVSp | CE51809:p.Pro657= | |||||
cDNA_position | 1971 | |||||
CDS_position | 1971 | |||||
Protein_position | 657 | |||||
Exon_number | 5/6 | |||||
Codon_change | ccA/ccG | |||||
Amino_acid_change | P | |||||
K04G2.8b.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | K04G2.8b.1:c.1971A>G | |||||
HGVSp | CE18016:p.Pro657= | |||||
cDNA_position | 1971 | |||||
CDS_position | 1971 | |||||
Protein_position | 657 | |||||
Exon_number | 5/8 | |||||
Codon_change | ccA/ccG | |||||
Amino_acid_change | P | |||||
K04G2.8a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | K04G2.8a.1:c.1965A>G | |||||
HGVSp | CE06102:p.Pro655= | |||||
cDNA_position | 1971 | |||||
CDS_position | 1965 | |||||
Protein_position | 655 | |||||
Exon_number | 6/9 | |||||
Codon_change | ccA/ccG | |||||
Amino_acid_change | P | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |