WormBase Tree Display for Variation: WBVar01431360
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WBVar01431360 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01431360 | ||||
Other_name | cewivar00323067 | |||||
CE52179:p.Leu8475Ile | ||||||
CE52283:p.Leu7477Ile | ||||||
ZK973.6b.1:c.22429C>A | ||||||
CE33588:p.Leu8482Ile | ||||||
ZK973.6c.1:c.25423C>A | ||||||
ZK973.6a.1:c.25444C>A | ||||||
HGVSg | CHROMOSOME_I:g.4358630C>A | |||||
Sequence_details | SMap | S_parent | Sequence | ZK973 | ||
Flanking_sequences | CCTGACGATTCGACTCTCAGTGAAGAACAA | TCCGACGACAAAGATCCCGTTGGAGACGGG | ||||
Mapping_target | ZK973 | |||||
Type_of_mutation | Substitution | c | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00023224 | From_analysis | WGS_Andersen | ||||
WBStrain00023234 | From_analysis | WGS_Andersen | ||||
WBStrain00023280 | From_analysis | WGS_Andersen | ||||
WBStrain00023281 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193319423 | ||
dbSNP_ss | ss | 295495340 | ||||
Status | Live | |||||
Affects | Gene | WBGene00000140 | ||||
Transcript | ZK973.6c.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | ZK973.6c.1:c.25423C>A | |||||
HGVSp | CE52179:p.Leu8475Ile | |||||
cDNA_position | 25423 | |||||
CDS_position | 25423 | |||||
Protein_position | 8475 | |||||
Exon_number | 29/30 | |||||
Codon_change | Ctc/Atc | |||||
Amino_acid_change | L/I | |||||
ZK973.6b.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
HGVSc | ZK973.6b.1:c.22429C>A | |||||
HGVSp | CE52283:p.Leu7477Ile | |||||
cDNA_position | 22515 | |||||
CDS_position | 22429 | |||||
Protein_position | 7477 | |||||
Exon_number | 19/20 | |||||
Codon_change | Ctc/Atc | |||||
Amino_acid_change | L/I | |||||
ZK973.6a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
HGVSc | ZK973.6a.1:c.25444C>A | |||||
HGVSp | CE33588:p.Leu8482Ile | |||||
cDNA_position | 25444 | |||||
CDS_position | 25444 | |||||
Protein_position | 8482 | |||||
Exon_number | 29/31 | |||||
Codon_change | Ctc/Atc | |||||
Amino_acid_change | L/I | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |