WormBase Tree Display for Variation: WBVar01421172
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WBVar01421172 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01421172 | |||||
Other_name | cewivar00278226 | ||||||
Y54E10BR.7.1:c.981T>C | |||||||
CE28995:p.Leu327= | |||||||
HGVSg | CHROMOSOME_I:g.3041946A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |||
Flanking_sequences | TTCTCGAAATCCGGTGTCACATAATAATAGAGACCATTCTTTGCTCCAGG | AGAAGAAGTCCACGTATAAGAAGAATACTTAGAATAATATATGGAGCTGT | |||||
Mapping_target | Y54E10BR | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539128507 | |||
Status | Live | ||||||
Affects | Gene | WBGene00003387 | |||||
Transcript | Y54E10BR.7.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | Y54E10BR.7.1:c.981T>C | ||||||
HGVSp | CE28995:p.Leu327= | ||||||
cDNA_position | 981 | ||||||
CDS_position | 981 | ||||||
Protein_position | 327 | ||||||
Exon_number | 7/13 | ||||||
Codon_change | ctT/ctC | ||||||
Amino_acid_change | L | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |