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WormBase Tree Display for Variation: WBVar01420800

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Name Class

WBVar01420800EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01420800
Other_namecewivar00680805
T02E1.5a.1:c.386-311del
T02E1.5b.1:c.392-311del
HGVSgCHROMOSOME_I:g.8213586del
Sequence_detailsSMapS_parentSequenceT02E1
Flanking_sequencesACTTCGTATGTTTCTAAATCTCTACAGTATGCAATTAGCAAGGGATGTGCTTTTTGCCAGTGGGTCCCGCCGCGCCATTCAAATTCATTTAATTAATACC
Mapping_targetT02E1
Type_of_mutationDeletionTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539069603
StatusLive
AffectsGeneWBGene00000967
TranscriptT02E1.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT02E1.5b.1:c.392-311del
Intron_number2/6
T02E1.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT02E1.5a.1:c.386-311del
Intron_number3/7
ReferenceWBPaper00037807
MethodWGS_De_Bono