WormBase Tree Display for Variation: WBVar01415193
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| WBVar01415193 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01415193 | ||||
| Other_name | cewivar00741093 | |||||
| CE51680:p.Tyr251_Gly252insValGly | ||||||
| CE39403:p.Tyr280_Gly281insValGly | ||||||
| T12B5.6c.1:c.754_755insTCGGCG | ||||||
| T12B5.6b.1:c.841_842insTCGGCG | ||||||
| HGVSg | CHROMOSOME_III:g.933697_933698insCGCCGA | |||||
| Sequence_details | SMap | S_parent | Sequence | T12B5 | ||
| Flanking_sequences | AATACCGAATTTGTCGTTACCATTTGAATATTCGATATTAAATTCATTGC | CATAGTCCGATTTAAATACTTTTGCAATTTCCATCGGATTTATTTTTGAA | ||||
| Mapping_target | T12B5 | |||||
| Type_of_mutation | Insertion | CGCCGA | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539200982 | ||
| History | Acquires_merge | WBVar02012668 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00020453 | ||||
| Transcript | T12B5.6c.1 | VEP_consequence | inframe_insertion | |||
| VEP_impact | MODERATE | |||||
| HGVSc | T12B5.6c.1:c.754_755insTCGGCG | |||||
| HGVSp | CE51680:p.Tyr251_Gly252insValGly | |||||
| cDNA_position | 772-773 | |||||
| CDS_position | 754-755 | |||||
| Protein_position | 252 | |||||
| Exon_number | 4/5 | |||||
| Codon_change | ggc/gTCGGCGgc | |||||
| Amino_acid_change | G/VGG | |||||
| T12B5.6b.1 | VEP_consequence | inframe_insertion | ||||
| VEP_impact | MODERATE | |||||
| HGVSc | T12B5.6b.1:c.841_842insTCGGCG | |||||
| HGVSp | CE39403:p.Tyr280_Gly281insValGly | |||||
| cDNA_position | 861-862 | |||||
| CDS_position | 841-842 | |||||
| Protein_position | 281 | |||||
| Exon_number | 4/5 | |||||
| Codon_change | ggc/gTCGGCGgc | |||||
| Amino_acid_change | G/VGG | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
