WormBase Tree Display for Variation: WBVar01412515
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WBVar01412515 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01412515 | ||||
Other_name | K07E8.3.1:c.378_379insC | |||||
K07E8.3.2:c.378_379insC | ||||||
CE29512:p.Lys127GlnfsTer24 | ||||||
HGVSg | CHROMOSOME_II:g.659220_659221insC | |||||
Sequence_details | SMap | S_parent | Sequence | K07E8 | ||
Flanking_sequences | CAAACTTTGTAACTCCGATTGCAACACTCAATGCTCCCAAGATTATTTAT | AAGGTTCATGGAATGATAACACAGCGGGGCAAATATTCCAAAAAAGAAGT | ||||
Mapping_target | K07E8 | |||||
Type_of_mutation | Insertion | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
DB_info | Database | dbSNP_ss | ss | 539198572 | ||
Status | Live | |||||
Affects | Gene | WBGene00019495 | ||||
Transcript | K07E8.3.1 | VEP_consequence | frameshift_variant | |||
VEP_impact | HIGH | |||||
HGVSc | K07E8.3.1:c.378_379insC | |||||
HGVSp | CE29512:p.Lys127GlnfsTer24 | |||||
cDNA_position | 411-412 | |||||
CDS_position | 378-379 | |||||
Protein_position | 126-127 | |||||
Exon_number | 5/8 | |||||
Codon_change | -/C | |||||
Amino_acid_change | -/X | |||||
K07E8.3.2 | VEP_consequence | frameshift_variant | ||||
VEP_impact | HIGH | |||||
HGVSc | K07E8.3.2:c.378_379insC | |||||
HGVSp | CE29512:p.Lys127GlnfsTer24 | |||||
cDNA_position | 411-412 | |||||
CDS_position | 378-379 | |||||
Protein_position | 126-127 | |||||
Exon_number | 5/8 | |||||
Codon_change | -/C | |||||
Amino_acid_change | -/X | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |