WormBase Tree Display for Variation: WBVar01410608
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WBVar01410608 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01410608 | ||||
Other_name | cewivar00642314 | |||||
Y105C5A.15a.1:c.-118-1_-118insC | ||||||
Y105C5A.15c.1:c.359-2066_359-2065insC | ||||||
Y105C5A.15e.1:c.359-2066_359-2065insC | ||||||
HGVSg | CHROMOSOME_IV:g.15710802_15710803insC | |||||
Sequence_details | SMap | S_parent | Sequence | Y105C5A | ||
Flanking_sequences | CAACTAACAATCTAAGGCCCCTAATCAAACTTAACGTGTTTCCTCTGCAG | CCCATTCCGTCCGGGTTCATTCGACGCCGGCCGATCGGCATTCTCCCCCG | ||||
Mapping_target | Y105C5A | |||||
Type_of_mutation | Insertion | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (42) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539124867 | ||
History | Acquires_merge | WBVar01417277 | ||||
WBVar01923827 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00013639 | ||||
Transcript | Y105C5A.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y105C5A.15c.1:c.359-2066_359-2065insC | |||||
Intron_number | 3/10 | |||||
Y105C5A.15a.1 | VEP_consequence | splice_region_variant,5_prime_UTR_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y105C5A.15a.1:c.-118-1_-118insC | |||||
cDNA_position | 308-309 | |||||
Y105C5A.15e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105C5A.15e.1:c.359-2066_359-2065insC | |||||
Intron_number | 3/10 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |