WormBase Tree Display for Variation: WBVar01407112
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WBVar01407112 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01407112 | ||||
Other_name | cewivar00686725 | |||||
R05H10.5a.1:c.*473_*474insCTG | ||||||
R05H10.5b.1:c.*473_*474insCTG | ||||||
HGVSg | CHROMOSOME_II:g.14869501_14869502insCTG | |||||
Sequence_details | SMap | S_parent | Sequence | R05H10 | ||
Flanking_sequences | TTAAATTTTCCGGTTTTCTAAGCTTTTTTTTCGAGAATTTCACTAAAAAT | CGAATTTTCCAGATTTTCAATTTTTTTCCCTCATTTTCACTCAATTTTCT | ||||
Mapping_target | R05H10 | |||||
Type_of_mutation | Insertion | CTG | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539121722 | ||
History | Acquires_merge | WBVar01415020 | ||||
WBVar01961186 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00011045 | ||||
Transcript | R05H10.5a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.5a.1:c.*473_*474insCTG | |||||
cDNA_position | 977-978 | |||||
Exon_number | 5/5 | |||||
R05H10.5b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.5b.1:c.*473_*474insCTG | |||||
cDNA_position | 1013-1014 | |||||
Exon_number | 5/5 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |