WormBase Tree Display for Variation: WBVar01405462
expand all nodes | collapse all nodes | view schema
| WBVar01405462 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01405462 | ||||
| Other_name | cewivar00671165 | |||||
| C01G6.1b.1:c.690-238dup | ||||||
| C01G6.1a.1:c.690-238dup | ||||||
| C01G6.1b.2:c.690-238dup | ||||||
| HGVSg | CHROMOSOME_II:g.9260066_9260067insT | |||||
| Sequence_details | SMap | S_parent | Sequence | C01G6 | ||
| Flanking_sequences | TTCCCCTTACGGAAATGGGCCAAGATTCTATGTTTGTTCTCAAAAATTTC | TTTTTTTTTGATTTCCCTCAAAATTCGTTGACCGAGAAGGGAGTTGGCAA | ||||
| Mapping_target | C01G6 | |||||
| Type_of_mutation | Insertion | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539120237 | ||
| History | Acquires_merge | WBVar01949257 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00000170 | ||||
| Transcript | C01G6.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C01G6.1b.1:c.690-238dup | |||||
| Intron_number | 4/7 | |||||
| C01G6.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C01G6.1a.1:c.690-238dup | |||||
| Intron_number | 4/6 | |||||
| C01G6.1b.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C01G6.1b.2:c.690-238dup | |||||
| Intron_number | 4/6 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
