WormBase Tree Display for Variation: WBVar01392436
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| WBVar01392436 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01392436 | ||||
| Other_name | cewivar00737834 | |||||
| T27F6.5d.1:c.122+265del | ||||||
| T27F6.5a.1:c.122+265del | ||||||
| HGVSg | CHROMOSOME_I:g.12487427del | |||||
| Sequence_details | SMap | S_parent | Sequence | T27F6 | ||
| Flanking_sequences | GAAAATTGTCGAATTCAGCGCAAAAATGCCCAAAATTTTTCCATAAACGG | TTTTTTTCCACAAAAAACCTCATTTTGCAGTTCGAAAATTAGATTTTTAC | ||||
| Mapping_target | T27F6 | |||||
| Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539111988 | ||
| Status | Live | |||||
| Affects | Gene | WBGene00004190 | ||||
| Transcript | T27F6.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | T27F6.5a.1:c.122+265del | |||||
| Intron_number | 2/7 | |||||
| T27F6.5d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | T27F6.5d.1:c.122+265del | |||||
| Intron_number | 2/7 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
