WormBase Tree Display for Variation: WBVar01387483
expand all nodes | collapse all nodes | view schema
WBVar01387483 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01387483 | |||||
Other_name | cewivar00190555 | ||||||
CE19610:p.Lys108= | |||||||
W05G11.6.1:c.324A>G | |||||||
HGVSg | CHROMOSOME_III:g.65372T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | |||
Flanking_sequences | TCTGGGGTATGGCAGACTGAGTCGTACTTGTCCTTGGTGACCATCCAGGT | TTGGACTCGACGCGGGCCACATCACGTGGGTCGGTACGGCAGAGGTAGCT | |||||
Mapping_target | F54C4 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539062934 | |||
Status | Live | ||||||
Affects | Gene | WBGene00021043 | |||||
Transcript | W05G11.6.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | W05G11.6.1:c.324A>G | ||||||
HGVSp | CE19610:p.Lys108= | ||||||
cDNA_position | 328 | ||||||
CDS_position | 324 | ||||||
Protein_position | 108 | ||||||
Exon_number | 3/7 | ||||||
Codon_change | aaA/aaG | ||||||
Amino_acid_change | K | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |