WormBase Tree Display for Variation: WBVar01374823
expand all nodes | collapse all nodes | view schema
WBVar01374823 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01374823 | ||||
Other_name | cewivar00654618 | |||||
F22D3.2e.1:c.*360_*361insT | ||||||
F22D3.2d.1:c.*360_*361insT | ||||||
F22D3.2c.1:c.*360_*361insT | ||||||
F22D3.2j.1:c.*360_*361insT | ||||||
F22D3.2g.1:c.*360_*361insT | ||||||
HGVSg | CHROMOSOME_II:g.6947306_6947307insT | |||||
Sequence_details | SMap | S_parent | Sequence | F22D3 | ||
Flanking_sequences | CTTGACTCATAATATGATTTTTTTCTTACATTCTAAACATCTCGTTTTTC | TTTTTTTTTCTATTGAATTCTTCAAAGTGTGTAGTCGTTCTAGCCGATTC | ||||
Mapping_target | F22D3 | |||||
Type_of_mutation | Insertion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (31) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539050225 | ||
History | Acquires_merge | WBVar01413570 | ||||
WBVar01405207 | ||||||
WBVar01934865 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00017699 | ||||
Transcript | F22D3.2g.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F22D3.2g.1:c.*360_*361insT | |||||
cDNA_position | 2338-2339 | |||||
Exon_number | 19/19 | |||||
F22D3.2e.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F22D3.2e.1:c.*360_*361insT | |||||
cDNA_position | 2317-2318 | |||||
Exon_number | 19/19 | |||||
F22D3.2c.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F22D3.2c.1:c.*360_*361insT | |||||
cDNA_position | 1313-1314 | |||||
Exon_number | 7/7 | |||||
F22D3.2d.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F22D3.2d.1:c.*360_*361insT | |||||
cDNA_position | 2326-2327 | |||||
Exon_number | 19/19 | |||||
F22D3.2j.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F22D3.2j.1:c.*360_*361insT | |||||
cDNA_position | 2336-2337 | |||||
Exon_number | 19/19 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |