WormBase Tree Display for Variation: WBVar01340274
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WBVar01340274 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01340274 | |||||
Other_name | F41B4.4a.1:c.1015-61C>A | ||||||
F41B4.4b.1:c.-990-61C>A | |||||||
HGVSg | CHROMOSOME_X:g.6838696G>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F41B4 | |||
Flanking_sequences | AATATAAGGTACTAGTCCTAAATCACCCCGCCACTTTTTTTCTTTTTTTT | TTCGTTTTTTTTTTGAACACGTGGAATAATAACTCGTTCAGATTAAAATC | |||||
Mapping_target | F41B4 | ||||||
Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00026322 | From_analysis | WGS_De_Bono | ||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
DB_info | Database | dbSNP_ss | ss | 539136796 | |||
Status | Live | ||||||
Affects | Gene | WBGene00001617 | |||||
Transcript | F41B4.4a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | F41B4.4a.1:c.1015-61C>A | ||||||
Intron_number | 7/14 | ||||||
F41B4.4b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F41B4.4b.1:c.-990-61C>A | ||||||
Intron_number | 1/8 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |