WormBase Tree Display for Variation: WBVar01339000
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WBVar01339000 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01339000 | |||||
Other_name | cewivar00153885 | ||||||
Y37D8A.23a.1:c.255+124G>A | |||||||
Y37D8A.23c.1:c.31-868G>A | |||||||
Y37D8A.23b.1:c.255+124G>A | |||||||
HGVSg | CHROMOSOME_III:g.12944093G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y37D8A | |||
Flanking_sequences | TTGTGCTTGTGCTTAGGCTTTGGCTTAGGTTTAGGCCTAGGTATAGACTC | AGCGGCTCAGGAAATATTAATTAGTTTGAACTAGGAGTTTGAAATATTCG | |||||
Mapping_target | Y37D8A | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539193381 | |||
Status | Live | ||||||
Affects | Gene | WBGene00006762 | |||||
Transcript | Y37D8A.23c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y37D8A.23c.1:c.31-868G>A | ||||||
Intron_number | 1/5 | ||||||
Y37D8A.23b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y37D8A.23b.1:c.255+124G>A | ||||||
Intron_number | 3/8 | ||||||
Y37D8A.23a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y37D8A.23a.1:c.255+124G>A | ||||||
Intron_number | 4/9 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |