WormBase Tree Display for Variation: WBVar01328592

WBVar01328592 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01328592
    Other_name: cewivar00398858
      Y71H2AM.5.2:c.-5+21890G>A
      Y71H2AM.11.1:c.325-3C>T
    HGVSg: CHROMOSOME_III:g.2721574G>A
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: TTTTCCGTCGATTTCAGTTAATTCGAATGGATTTGTGTTCCAGCCATCCT CAATAGTTTAGATTAGGTTTCTAGGCTTTTGGTTTTCAAAAAAGTCGAAA
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: g A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539184013
    Status: Live
  Affects: Gene: WBGene00022170
      WBGene00022176
    Transcript: Y71H2AM.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.5.2:c.-5+21890G>A
        Intron_number: 1/5
      Y71H2AM.11.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: Y71H2AM.11.1:c.325-3C>T
        Intron_number: 5/8
  Reference: WBPaper00037807
  Method: WGS_De_Bono