WormBase Tree Display for Variation: WBVar01325169
expand all nodes | collapse all nodes | view schema
WBVar01325169 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01325169 | |||||
Other_name | cewivar00021283 | ||||||
Y22D7AL.9.1:c.1994+7C>T | |||||||
Y22D7AL.9.2:c.1994+7C>T | |||||||
HGVSg | CHROMOSOME_III:g.1609338G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y22D7AL | |||
Flanking_sequences | AAAAACTACTTGCCGGGGTTAAATTTAACGAGGAATTCAAATTTCTACAT | ACAAACCTCTCCAACTCAGCTCGAGCCAGCAAAATGAGCATTTCCACTTT | |||||
Mapping_target | Y22D7AL | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (92) | |||||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539180932 | |||
History | Acquires_merge | WBVar01443798 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00021247 | |||||
Transcript | Y22D7AL.9.2 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | Y22D7AL.9.2:c.1994+7C>T | ||||||
Intron_number | 7/10 | ||||||
Y22D7AL.9.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | Y22D7AL.9.1:c.1994+7C>T | ||||||
Intron_number | 7/11 | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |