WormBase Tree Display for Gene: WBGene00021247
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| WBGene00021247 | SMap | S_parent | Sequence | Y22D7AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y22D7AL.9 | |||||||
| Molecular_name | Y22D7AL.9 | ||||||||
| Y22D7AL.9.1 | |||||||||
| CE37423 | |||||||||
| Y22D7AL.9.2 | |||||||||
| Other_name | CELE_Y22D7AL.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y22D7AL.9 | ||||||||
| DB_info | Database | AceView | gene | 3C698 | |||||
| WormQTL | gene | WBGene00021247 | |||||||
| WormFlux | gene | WBGene00021247 | |||||||
| NDB | locus_tag | CELE_Y22D7AL.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021247|UniProtKB=Q965Q2 | |||||||
| family | PTHR10098 | ||||||||
| NCBI | gene | 175314 | |||||||
| RefSeq | protein | NM_065026.9 | |||||||
| TREEFAM | TREEFAM_ID | TF344255 | |||||||
| TrEMBL | UniProtAcc | Q965Q2 | |||||||
| UniProt_GCRP | UniProtAcc | Q965Q2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (161) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00191027 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WBGene00032787 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | |||||||||
| WBGene00067903 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00122814 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00229481 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Pan_g18126 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g6982 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00244816 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00000092 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00004507 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including Caaaaa; Caaaap; Caaapa; Caaapp; and arc ant V based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including Zidovudine; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tetratricopeptide-like helical domain superfamily and Tetratricopeptide repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y22D7AL.9 | |||||||
| Corresponding_CDS_history | Y22D7AL.9:wp130 | ||||||||
| Corresponding_transcript | Y22D7AL.9.1 | ||||||||
| Y22D7AL.9.2 | |||||||||
| Other_sequence | EW743854.1 | ||||||||
| Associated_feature | WBsf991339 | ||||||||
| WBsf991340 | |||||||||
| WBsf991341 | |||||||||
| WBsf1014268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055674 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106369 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017960 | ||||||||
| Expr1039263 | |||||||||
| Expr1159200 | |||||||||
| Expr2007155 | |||||||||
| Expr2025387 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (128) | |||||||||
| Map_info | Positive | Positive_clone | Y22D7AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -20.2791 | |||||||
| Method | Gene |
