WormBase Tree Display for Variation: WBVar01322756
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WBVar01322756 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01322756 | |||||
Other_name | CE51680:p.Phe226= | ||||||
T12B5.6c.1:c.678C>T | |||||||
CE39403:p.Phe255= | |||||||
T12B5.6b.1:c.765C>T | |||||||
HGVSg | CHROMOSOME_III:g.933774G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | |||
Flanking_sequences | ATTTCCATCGGATTTATTTTTGAACTGACAAAATATATCGTGCAACTTTG | AATGTACTTCTTCTCAAAAGATCCTGCAAAAAAGATAATTAAATGAAAAA | |||||
Mapping_target | T12B5 | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
DB_info | Database | dbSNP_ss | ss | 539178761 | |||
Status | Live | ||||||
Affects | Gene | WBGene00020453 | |||||
Transcript | T12B5.6c.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | T12B5.6c.1:c.678C>T | ||||||
HGVSp | CE51680:p.Phe226= | ||||||
cDNA_position | 696 | ||||||
CDS_position | 678 | ||||||
Protein_position | 226 | ||||||
Exon_number | 4/5 | ||||||
Codon_change | ttC/ttT | ||||||
Amino_acid_change | F | ||||||
T12B5.6b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | T12B5.6b.1:c.765C>T | ||||||
HGVSp | CE39403:p.Phe255= | ||||||
cDNA_position | 785 | ||||||
CDS_position | 765 | ||||||
Protein_position | 255 | ||||||
Exon_number | 4/5 | ||||||
Codon_change | ttC/ttT | ||||||
Amino_acid_change | F | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |