WormBase Tree Display for Variation: WBVar01307508

WBVar01307508 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01307508
    Other_name: cewivar00091459
      C27H5.4b.1:c.504T>A
      C27H5.4a.1:c.516T>A
      CE50636:p.Thr172=
      CE50643:p.Thr168=
    HGVSg: CHROMOSOME_II:g.7164073A>T
  Sequence_details: SMap: S_parent: Sequence: C27H5
    Flanking_sequences: ACAACACAACATAGCTGGAAAAGCCAATAATGTTCATTTGTATGTGGCAT GTTTCCAATGGATAAATGAGAAGTCCGGCGACAATTGTAAAGATTTCCCC
    Mapping_target: C27H5
    Type_of_mutation: Substitution: a T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (152)
    Laboratory: AX
      QX
    Person: WBPerson1730
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_ss ss 539165037
    History: Acquires_merge: WBVar01373160
        WBVar01438381
    Status: Live
  Affects: Gene: WBGene00016174
    Transcript: C27H5.4a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C27H5.4a.1:c.516T>A
        HGVSp: CE50636:p.Thr172=
        cDNA_position: 616
        CDS_position: 516
        Protein_position: 172
        Exon_number: 5/11
        Codon_change: acT/acA
        Amino_acid_change: T
      C27H5.4b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C27H5.4b.1:c.504T>A
        HGVSp: CE50643:p.Thr168=
        cDNA_position: 516
        CDS_position: 504
        Protein_position: 168
        Exon_number: 5/11
        Codon_change: acT/acA
        Amino_acid_change: T
  Reference: WBPaper00040707
    WBPaper00037807
  Method: WGS_De_Bono