WormBase Tree Display for Variation: WBVar01296889

WBVar01296889 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01296889
    Other_name: cewivar00354524
      F59H6.11.1:c.715G>A
      CE20917:p.Glu239Lys
    HGVSg: CHROMOSOME_II:g.2031092C>T
  Sequence_details: SMap: S_parent: Sequence: F59H6
    Flanking_sequences: GATTTTAAGCTTCTCCTTTATCGATTTTTCAGACAAATCGATAAGGAATT CTCGCATTTGCGAGTTGGGAACGGCATATCGTACTTGTCAGCCAAATCAC
    Mapping_target: F59H6
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539155481
    Status: Live
  Affects: Gene: WBGene00019141
    Transcript: F59H6.11.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.18 tolerated
        PolyPhen: 0.424 benign
        HGVSc: F59H6.11.1:c.715G>A
        HGVSp: CE20917:p.Glu239Lys
        cDNA_position: 729
        CDS_position: 715
        Protein_position: 239
        Exon_number: 5/7
        Codon_change: Gaa/Aaa
        Amino_acid_change: E/K
  Reference: WBPaper00037807
  Method: WGS_De_Bono