WormBase Tree Display for Variation: WBVar01295549
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WBVar01295549 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01295549 | |||||
Other_name | cewivar00353725 | ||||||
C08E3.4:n.547A>G | |||||||
HGVSg | CHROMOSOME_II:g.1607057T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | C08E3 | |||
Flanking_sequences | CCATTCAGTATAAGTTTTTTCAGTCTTTCCGCAGGGAAAATGGGCAACAG | TGGGCAAGTTCTGGATATGCAACGAATTGGGTTTGCACAGTTTTTGATGT | |||||
Mapping_target | C08E3 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539154275 | |||
Status | Live | ||||||
Affects | Gene | WBGene00015596 | |||||
Pseudogene | C08E3.4 | VEP_consequence | non_coding_transcript_exon_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | C08E3.4:n.547A>G | ||||||
cDNA_position | 547 | ||||||
Exon_number | 1/2 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |