WormBase Tree Display for Variation: WBVar01293958
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WBVar01293958 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01293958 | |||||
Other_name | cewivar00507478 | ||||||
W09B6.4d.1:c.194+1461C>G | |||||||
W09B6.4a.2:c.-8+1462C>G | |||||||
W09B6.1c.1:c.158-1452G>C | |||||||
W09B6.1a.1:c.-176-1452G>C | |||||||
HGVSg | CHROMOSOME_II:g.1138890G>C | ||||||
Sequence_details | SMap | S_parent | Sequence | W09B6 | |||
Flanking_sequences | TCAGCAGTGATTATCAGAGAAATCTTAACAATTTCACCCGATTCCCCGGG | GAAAAATAGTGTGCAGCGAACGTTCATAGGTTAACTATATGCTGAAAGTT | |||||
Mapping_target | W09B6 | ||||||
Type_of_mutation | Substitution | g | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539152842 | |||
Status | Live | ||||||
Affects | Gene | WBGene00021104 | |||||
WBGene00004076 | |||||||
Transcript | W09B6.4a.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | W09B6.4a.2:c.-8+1462C>G | ||||||
Intron_number | 2/9 | ||||||
W09B6.1c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | W09B6.1c.1:c.158-1452G>C | ||||||
Intron_number | 2/10 | ||||||
W09B6.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | W09B6.1a.1:c.-176-1452G>C | ||||||
Intron_number | 2/12 | ||||||
W09B6.4d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | W09B6.4d.1:c.194+1461C>G | ||||||
Intron_number | 2/7 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |