WormBase Tree Display for Variation: WBVar01292242
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WBVar01292242 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01292242 | |||||
Other_name | cewivar00506810 | ||||||
T04B8.5a.1:c.*28G>A | |||||||
T04B8.5b.1:c.*28G>A | |||||||
HGVSg | CHROMOSOME_II:g.614925C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | T04B8 | |||
Flanking_sequences | AATAAGTTGAAATACAGCACCATGGACACATTTTTGGGAAACGAAAAAAT | GATATTTTTCCGGGAAAAAATCAATAATTATAAGGCCGTAGAAATAACCG | |||||
Mapping_target | T04B8 | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539151298 | |||
Status | Live | ||||||
Affects | Gene | WBGene00020207 | |||||
Transcript | T04B8.5b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | T04B8.5b.1:c.*28G>A | ||||||
cDNA_position | 2927 | ||||||
Exon_number | 16/16 | ||||||
T04B8.5a.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T04B8.5a.1:c.*28G>A | ||||||
cDNA_position | 2890 | ||||||
Exon_number | 16/16 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |