WormBase Tree Display for Gene: WBGene00020207
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| WBGene00020207 | SMap | S_parent | Sequence | T04B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T04B8.5 | |||||||
| Molecular_name | T04B8.5a | ||||||||
| T04B8.5a.1 | |||||||||
| CE18193 | |||||||||
| T04B8.5b | |||||||||
| CE37041 | |||||||||
| T04B8.5d | |||||||||
| CE50210 | |||||||||
| T04B8.5b.1 | |||||||||
| T04B8.5c | |||||||||
| T04B8.5d.1 | |||||||||
| Other_name | T04B8.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| T04B8.c | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| T04B8.d | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T04B8.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T04B8.5 | ||||||||
| DB_info | Database | AceView | gene | 2A906 | |||||
| WormQTL | gene | WBGene00020207 | |||||||
| WormFlux | gene | WBGene00020207 | |||||||
| NDB | locus_tag | CELE_T04B8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020207|UniProtKB=O44846 | |||||||
| family | PTHR11827 | ||||||||
| NCBI | gene | 173453 | |||||||
| RefSeq | protein | NR_132579.1 | |||||||
| NM_001027135.3 | |||||||||
| NM_001313663.3 | |||||||||
| NM_001027134.6 | |||||||||
| TrEMBL | UniProtAcc | Q6A583 | |||||||
| A0A0K3AX20 | |||||||||
| O44846 | |||||||||
| UniProt_GCRP | UniProtAcc | O44846 | |||||||
| RNAcentral | URSid | URS000086160D | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (200) | |||||||||
| Strain | WBStrain00001827 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00006504 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012543 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015131 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017350 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019205 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019289 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable potassium:chloride symporter activity. Predicted to be involved in cell volume homeostasis; chloride transmembrane transport; and inorganic ion homeostasis. Predicted to be located in membrane. Is an ortholog of human SLC12A9 (solute carrier family 12 member 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04B8.5a | |||||||
| T04B8.5b | |||||||||
| T04B8.5d | |||||||||
| Corresponding_CDS_history | T04B8.5:wp127 | ||||||||
| T04B8.5c:wp245 | |||||||||
| Corresponding_transcript | T04B8.5c | ||||||||
| T04B8.5a.1 | |||||||||
| T04B8.5b.1 | |||||||||
| T04B8.5d.1 | |||||||||
| Other_sequence (52) | |||||||||
| Associated_feature | WBsf649831 | ||||||||
| WBsf665333 | |||||||||
| WBsf986455 | |||||||||
| WBsf1011417 | |||||||||
| WBsf1011418 | |||||||||
| WBsf222618 | |||||||||
| WBsf222619 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018128 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035128 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram306 | ||||||||
| Expr6594 | |||||||||
| Expr1016012 | |||||||||
| Expr1038791 | |||||||||
| Expr1155989 | |||||||||
| Expr2005805 | |||||||||
| Expr2024022 | |||||||||
| Drives_construct | WBCnstr00002623 | ||||||||
| WBCnstr00025299 | |||||||||
| Construct_product | WBCnstr00025299 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Positive | Positive_clone | T04B8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5933 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
