WormBase Tree Display for Variation: WBVar01286379
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WBVar01286379 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01286379 | |||||
Other_name | cewivar00324522 | ||||||
CE23872:p.Phe849= | |||||||
M01G12.12.1:c.2547T>C | |||||||
M01G12.12.2:c.2547T>C | |||||||
HGVSg | CHROMOSOME_I:g.12102128A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | Y47H10A | |||
Flanking_sequences | TTGGAATCTCGAGGTGGGAGTATGTTCCTGTGATTTTTCGTGTATTGAAC | AAGACCTGTCCGTATTGTAGAATCCCAGTCTCGTCGACAACGCCAAGCAT | |||||
Mapping_target | Y47H10A | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (17) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539146021 | |||
History | Acquires_merge | WBVar01425259 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00004509 | |||||
Transcript | M01G12.12.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | M01G12.12.1:c.2547T>C | ||||||
HGVSp | CE23872:p.Phe849= | ||||||
cDNA_position | 2606 | ||||||
CDS_position | 2547 | ||||||
Protein_position | 849 | ||||||
Exon_number | 14/23 | ||||||
Codon_change | ttT/ttC | ||||||
Amino_acid_change | F | ||||||
M01G12.12.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | M01G12.12.2:c.2547T>C | ||||||
HGVSp | CE23872:p.Phe849= | ||||||
cDNA_position | 2566 | ||||||
CDS_position | 2547 | ||||||
Protein_position | 849 | ||||||
Exon_number | 13/22 | ||||||
Codon_change | ttT/ttC | ||||||
Amino_acid_change | F | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |