WormBase Tree Display for Variation: WBVar01284372
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WBVar01284372 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01284372 | |||||
Other_name | cewivar00074504 | ||||||
F28D9.2b.1:c.169-198G>A | |||||||
F28D9.2a.1:c.292-198G>A | |||||||
HGVSg | CHROMOSOME_I:g.11184073G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F28D9 | |||
Flanking_sequences | TTGATCTACAAAAAATGCGGGAACGTGCTGACGTCACATTTTTTCGACCA | AAAATTTCCGCTTTTTTTGTAGATCAAACCGTAATGGGACAGCCTGACGT | |||||
Mapping_target | F28D9 | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (23) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539144215 | |||
History | Acquires_merge | WBVar01348603 | |||||
WBVar01423346 | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00005517 | |||||
Transcript | F28D9.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | F28D9.2b.1:c.169-198G>A | ||||||
Intron_number | 2/7 | ||||||
F28D9.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F28D9.2a.1:c.292-198G>A | ||||||
Intron_number | 3/9 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |