WormBase Tree Display for Gene: WBGene00005517
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| WBGene00005517 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F28D9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-5 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F28D9.2 | ||||||||
| Molecular_name | F28D9.2a | ||||||||
| F28D9.2a.1 | |||||||||
| CE34482 | |||||||||
| F28D9.2b | |||||||||
| CE34483 | |||||||||
| F28D9.2b.1 | |||||||||
| Other_name | CELE_F28D9.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | sri-5 | ||||||||
| DB_info | Database | AceView | gene | 1L777 | |||||
| WormQTL | gene | WBGene00005517 | |||||||
| WormFlux | gene | WBGene00005517 | |||||||
| NDB | locus_tag | CELE_F28D9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005517|UniProtKB=Q7YZP5 | |||||||
| family | PTHR46964 | ||||||||
| NCBI | gene | 185064 | |||||||
| RefSeq | protein | NM_001026254.4 | |||||||
| NM_001026253.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315276 | |||||||
| TrEMBL | UniProtAcc | O62186 | |||||||
| Q7YZP5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q7YZP5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (82) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037258 | ||||||||
| Ortholog (31) | |||||||||
| Paralog (292) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in chemosensory neurons; egg-laying apparatus; pharynx; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28D9.2a | |||||||
| F28D9.2b | |||||||||
| Corresponding_CDS_history | F28D9.2:wp98 | ||||||||
| Corresponding_transcript | F28D9.2a.1 | ||||||||
| F28D9.2b.1 | |||||||||
| Associated_feature | WBsf985218 | ||||||||
| WBsf985219 | |||||||||
| WBsf985220 | |||||||||
| WBsf985221 | |||||||||
| WBsf985222 | |||||||||
| WBsf1010671 | |||||||||
| WBsf1010672 | |||||||||
| WBsf1010673 | |||||||||
| WBsf1010674 | |||||||||
| WBsf218520 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045836 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031530 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003517 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092946 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14091 | ||||||||
| Expr1019342 | |||||||||
| Expr1149743 | |||||||||
| Expr2016559 | |||||||||
| Expr2034755 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (50) | |||||||||
| Interaction | WBInteraction000336807 | ||||||||
| Map_info | Map | I | Position | 7.56944 | Error | 0.156168 | |||
| Positive | Positive_clone | F28D9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
