WormBase Tree Display for Variation: WBVar01280234
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| WBVar01280234 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01280234 | |||||
| Other_name | cewivar00504525 | ||||||
| Y54E10BR.7.1:c.50-586G>C | |||||||
| HGVSg | CHROMOSOME_I:g.3045335C>G | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |||
| Flanking_sequences | AAGCTAGGCACGTATACATCCATAAACAAGGTAGGTAAGTAGGCGGCAGG | ACTAGATAGATAAGCCGGAATGCATGAGATAGGTCCCCTAGGCATGAGAT | |||||
| Mapping_target | Y54E10BR | ||||||
| Type_of_mutation | Substitution | c | G | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_De_Bono | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539140491 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00003387 | |||||
| Transcript | Y54E10BR.7.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | Y54E10BR.7.1:c.50-586G>C | ||||||
| Intron_number | 1/12 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
