WormBase Tree Display for Variation: WBVar01267818
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WBVar01267818 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01267818 | ||||
Other_name | cewivar00672761 | |||||
R05H10.5b.1:c.204-292del | ||||||
R05H10.5a.1:c.156-292del | ||||||
HGVSg | CHROMOSOME_II:g.14868400del | |||||
Sequence_details | SMap | S_parent | Sequence | R05H10 | ||
Flanking_sequences | TCAAAAATAAATAAATAATTCAGCCGTTTTGTAATTTTTTTTTTTAAATT | AAAAAAAAAAATCATTAAAAAAATTAGAAAGCTTTCATAAATTTTTTCAC | ||||
Mapping_target | R05H10 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539008419 | ||
Status | Live | |||||
Affects | Gene | WBGene00011045 | ||||
Transcript | R05H10.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.5a.1:c.156-292del | |||||
Intron_number | 3/4 | |||||
R05H10.5b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.5b.1:c.204-292del | |||||
Intron_number | 3/4 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |