WormBase Tree Display for Variation: WBVar01263722

WBVar01263722 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01263722
    Other_name: cewivar00387384
      F09F7.5b.2:c.1495-5C>T
      F09F7.5a.2:c.1498-5C>T
      F09F7.5b.1:c.1495-5C>T
      F09F7.5a.1:c.1498-5C>T
    HGVSg: CHROMOSOME_III:g.5550296C>T
  Sequence_details: SMap: S_parent: Sequence: F09F7
    Flanking_sequences: AACATCAAAAAGTCAACAATCACCAATGTTCTTCTTCATTTGTTTTTCTT GCAGGTCTCAACGGAACCGTTAAAAGAAGAAGAAGAAGAAAATGTCGAAG
    Mapping_target: F09F7
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539099294
    Status: Live
  Affects: Gene: WBGene00017302
    Transcript: F09F7.5b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F09F7.5b.1:c.1495-5C>T
        Intron_number: 8/10
      F09F7.5a.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F09F7.5a.2:c.1498-5C>T
        Intron_number: 8/10
      F09F7.5a.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F09F7.5a.1:c.1498-5C>T
        Intron_number: 7/9
      F09F7.5b.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F09F7.5b.2:c.1495-5C>T
        Intron_number: 7/9
  Reference: WBPaper00037807
  Method: WGS_De_Bono