WormBase Tree Display for Variation: WBVar01262965
expand all nodes | collapse all nodes | view schema
WBVar01262965 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01262965 | |||||
Other_name | cewivar00387022 | ||||||
B0285.1b.1:c.*1432T>C | |||||||
B0285.1c.1:c.*1432T>C | |||||||
HGVSg | CHROMOSOME_III:g.4341664T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | B0285 | |||
Flanking_sequences | TTCAAGTATATTTTATTAGAAAAACGTATTTTGATCCACTTTCTGTAATA | TTTATCAACTTGATTGCCTCCGACTCTTTCTCGGGAGAAATATTCATTTT | |||||
Mapping_target | B0285 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539098612 | |||
Status | Live | ||||||
Affects | Gene | WBGene00007135 | |||||
Transcript | B0285.1c.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | B0285.1c.1:c.*1432T>C | ||||||
cDNA_position | 3788 | ||||||
Exon_number | 17/17 | ||||||
B0285.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | B0285.1b.1:c.*1432T>C | ||||||
cDNA_position | 3800 | ||||||
Exon_number | 17/17 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |