WormBase Tree Display for Variation: WBVar01262960
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| WBVar01262960 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01262960 | |||||
| Other_name | cewivar00387019 | ||||||
| B0285.1c.1:c.1978+32G>T | |||||||
| B0285.1a.2:c.1978+32G>T | |||||||
| B0285.1a.1:c.1978+32G>T | |||||||
| B0285.1c.2:c.1978+32G>T | |||||||
| B0285.1b.2:c.1978+32G>T | |||||||
| B0285.1b.1:c.1978+32G>T | |||||||
| HGVSg | CHROMOSOME_III:g.4339651G>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | B0285 | |||
| Flanking_sequences | GCAACTTCACATCCACGAGGTAAAGCTGGAGATGAATTGGAAGAAATAAA | ATTTCGGATTTTATTTTCCAGTTTTCTGAAAATAAAGTCAATTGAAAATC | |||||
| Mapping_target | B0285 | ||||||
| Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539098608 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00007135 | |||||
| Transcript | B0285.1c.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1c.2:c.1978+32G>T | ||||||
| Intron_number | 13/14 | ||||||
| B0285.1b.2 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1b.2:c.1978+32G>T | ||||||
| Intron_number | 13/14 | ||||||
| B0285.1c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1c.1:c.1978+32G>T | ||||||
| Intron_number | 15/16 | ||||||
| B0285.1a.2 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1a.2:c.1978+32G>T | ||||||
| Intron_number | 13/14 | ||||||
| B0285.1b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1b.1:c.1978+32G>T | ||||||
| Intron_number | 15/16 | ||||||
| B0285.1a.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | B0285.1a.1:c.1978+32G>T | ||||||
| Intron_number | 15/16 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
