WormBase Tree Display for Variation: WBVar01262301
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WBVar01262301 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01262301 | |||||
Other_name | cewivar00386661 | ||||||
C14B1.6a.1:c.594-5T>A | |||||||
HGVSg | CHROMOSOME_III:g.3714677T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | C14B1 | |||
Flanking_sequences | TGTAAGCAATTTTTTTTTTAATTTAAAATTAAAATAAAAATTCAAATTTT | TTAGCAAAGAAGCAGAAGAGCGGAAAGCAACGGCAGAAGCTACAAGAGAT | |||||
Mapping_target | C14B1 | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539098015 | |||
Status | Live | ||||||
Affects | Gene | WBGene00007577 | |||||
Transcript | C14B1.6a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | C14B1.6a.1:c.594-5T>A | ||||||
Intron_number | 5/15 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |