WormBase Tree Display for Variation: WBVar01262300
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WBVar01262300 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01262300 | |||||
Other_name | cewivar00386660 | ||||||
CE31415:p.Leu150= | |||||||
C14B1.6a.1:c.450T>G | |||||||
HGVSg | CHROMOSOME_III:g.3714484T>G | ||||||
Sequence_details | SMap | S_parent | Sequence | C14B1 | |||
Flanking_sequences | TTACATGATTGGCTGGCGGAATTCTATAAGGAAACAGTTACATCTCTTCT | GAAATGACCAGTATCACGGATCACGATCTGAAATGTTTTAAAGTTGGAAA | |||||
Mapping_target | C14B1 | ||||||
Type_of_mutation | Substitution | t | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006646 | From_analysis | WGS_Andersen | |||||
WBStrain00006647 | From_analysis | WGS_Andersen | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539098014 | |||
History | Acquires_merge | WBVar01445067 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00007577 | |||||
Transcript | C14B1.6a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | C14B1.6a.1:c.450T>G | ||||||
HGVSp | CE31415:p.Leu150= | ||||||
cDNA_position | 484 | ||||||
CDS_position | 450 | ||||||
Protein_position | 150 | ||||||
Exon_number | 5/16 | ||||||
Codon_change | ctT/ctG | ||||||
Amino_acid_change | L | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |