WormBase Tree Display for Variation: WBVar01259137
expand all nodes | collapse all nodes | view schema
WBVar01259137 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01259137 | |||||
Other_name | cewivar00023115 | ||||||
T20H9.1.1:c.138T>C | |||||||
CE39410:p.Ile46= | |||||||
HGVSg | CHROMOSOME_III:g.2250824A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | T20H9 | |||
Flanking_sequences | TATATTGTGACGTCTTTATCTTCTAAATAAAAACATATGCTATCAAAATG | ATTCCAATTCTATCTATAGATGCTCTCAAGCAACGGCACACTTTACGGCA | |||||
Mapping_target | T20H9 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (16) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539095168 | |||
Status | Live | ||||||
Affects | Gene | WBGene00020637 | |||||
Transcript | T20H9.1.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | T20H9.1.1:c.138T>C | ||||||
HGVSp | CE39410:p.Ile46= | ||||||
cDNA_position | 138 | ||||||
CDS_position | 138 | ||||||
Protein_position | 46 | ||||||
Exon_number | 2/4 | ||||||
Codon_change | atT/atC | ||||||
Amino_acid_change | I | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |