WormBase Tree Display for Variation: WBVar01250467
expand all nodes | collapse all nodes | view schema
WBVar01250467 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01250467 | |||||
Other_name | cewivar00098732 | ||||||
F54F11.2b.1:c.1524A>G | |||||||
CE11095:p.Lys637= | |||||||
CE43217:p.Lys508= | |||||||
F54F11.2a.1:c.1911A>G | |||||||
HGVSg | CHROMOSOME_II:g.13511270A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | F54F11 | |||
Flanking_sequences | TGGTATCAGCCAGAGCTCAACTCGATCACCTTCCCCGCTGGAATTCTTAA | AAGCCATTCTACGACTTCAACTGGCCAGCGTCGGTTAACTTCGGAGCAAT | |||||
Mapping_target | F54F11 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (111) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539087365 | |||
History | Acquires_merge | WBVar01441598 | |||||
WBVar01382068 | |||||||
WBVar01317137 | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00010070 | |||||
Transcript | F54F11.2b.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F54F11.2b.1:c.1524A>G | ||||||
HGVSp | CE43217:p.Lys508= | ||||||
cDNA_position | 1524 | ||||||
CDS_position | 1524 | ||||||
Protein_position | 508 | ||||||
Exon_number | 5/11 | ||||||
Codon_change | aaA/aaG | ||||||
Amino_acid_change | K | ||||||
F54F11.2a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | F54F11.2a.1:c.1911A>G | ||||||
HGVSp | CE11095:p.Lys637= | ||||||
cDNA_position | 1923 | ||||||
CDS_position | 1911 | ||||||
Protein_position | 637 | ||||||
Exon_number | 9/16 | ||||||
Codon_change | aaA/aaG | ||||||
Amino_acid_change | K | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |