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WormBase Tree Display for Variation: WBVar01246474

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Name Class

WBVar01246474EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01246474
Other_namecewivar00654045
F53C3.13b.1:c.848+374del
F53C3.13a.1:c.848+374del
F53C3.13e.1:c.848+374del
F53C3.13d.2:c.848+374del
F53C3.13d.1:c.848+374del
F53C3.13c.1:c.848+374del
F53C3.13f.1:c.854+374del
HGVSgCHROMOSOME_II:g.3925146del
Sequence_detailsSMapS_parentSequenceF53C3
Flanking_sequencesTAAAAATCGGTGTGCGCCTTTAAAAAAACTACCGTAACCCTTCAAGGGACTTTTTTTAAAAGATGTTCACATAAAGTTAGAGGTAAAAATCGAATTTCAA
Mapping_targetF53C3
Type_of_mutationDeletionTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539006285
StatusLive
AffectsGeneWBGene00018756
TranscriptF53C3.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13e.1:c.848+374del
Intron_number4/6
F53C3.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13b.1:c.848+374del
Intron_number4/6
F53C3.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.1:c.848+374del
Intron_number4/7
F53C3.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13a.1:c.848+374del
Intron_number4/6
F53C3.13d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.2:c.848+374del
Intron_number4/6
F53C3.13f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13f.1:c.854+374del
Intron_number4/6
F53C3.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13c.1:c.848+374del
Intron_number4/6
ReferenceWBPaper00037807
MethodWGS_De_Bono