WormBase Tree Display for Variation: WBVar01242917
expand all nodes | collapse all nodes | view schema
WBVar01242917 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01242917 | |||||
Other_name | cewivar00139905 | ||||||
T24H10.7a.1:c.184+1544T>C | |||||||
T24H10.7f.1:c.-113T>C | |||||||
T24H10.7b.1:c.124+1544T>C | |||||||
HGVSg | CHROMOSOME_II:g.9118440T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | T24H10 | |||
Flanking_sequences | GTGAGCTGTCTCGTTGAGCTGCTCTGAGAAATCGAGAGAGAGAGCCCTTG | CCACTACTTGCTCATTGAGCACAGAACGCAGAATTCTTGAGTTCTGGATT | |||||
Mapping_target | T24H10 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (22) | |||||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539080569 | |||
History | Acquires_merge | WBVar01438983 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00012005 | |||||
Transcript | T24H10.7f.1 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | T24H10.7f.1:c.-113T>C | ||||||
cDNA_position | 18 | ||||||
Exon_number | 1/9 | ||||||
T24H10.7a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T24H10.7a.1:c.184+1544T>C | ||||||
Intron_number | 3/9 | ||||||
T24H10.7b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T24H10.7b.1:c.124+1544T>C | ||||||
Intron_number | 3/9 | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |