WormBase Tree Display for Variation: WBVar01241788
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WBVar01241788 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01241788 | |||||
Other_name | cewivar00139544 | ||||||
T09A5.1a.1:c.450+264A>T | |||||||
T09A5.1b.1:c.*234A>T | |||||||
HGVSg | CHROMOSOME_II:g.7833838T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T09A5 | |||
Flanking_sequences | GAAAATCTGCAGTGGACGATGCTGTTTTTGAATTTTATTTTTGAAGATTT | CATTTTTGTTTTGGAATAATTTCGAATCCACATATCAAAGAGCGATGTTA | |||||
Mapping_target | T09A5 | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (14) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539079553 | |||
History | Acquires_merge | WBVar01308243 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00023408 | |||||
Transcript | T09A5.1b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | T09A5.1b.1:c.*234A>T | ||||||
cDNA_position | 714 | ||||||
Exon_number | 6/6 | ||||||
T09A5.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T09A5.1a.1:c.450+264A>T | ||||||
Intron_number | 6/7 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |