WormBase Tree Display for Variation: WBVar01235784
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WBVar01235784 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01235784 | ||||
Other_name | cewivar00631978 | |||||
Y105E8B.1f.1:c.241-1113del | ||||||
Y105E8B.1o.1:c.241-1113del | ||||||
Y105E8B.1d.1:c.241-1113del | ||||||
Y105E8B.1s.1:c.241-1113del | ||||||
Y105E8B.1q.1:c.241-1113del | ||||||
Y105E8B.1r.1:c.241-1113del | ||||||
Y105E8B.1p.1:c.241-1113del | ||||||
Y105E8B.1g.1:c.241-1113del | ||||||
Y105E8B.1a.1:c.241-1113del | ||||||
HGVSg | CHROMOSOME_I:g.14626032del | |||||
Sequence_details | SMap | S_parent | Sequence | Y105E8B | ||
Flanking_sequences | GGCAAACAATTTTGGGGTTAGAACAGCATGGAATCGCACTTTTTGTGGGG | TTTTTTTATGGAAATGTGGGTTCTGGTAGGCACGTGCTTTAGCTTTGGAA | ||||
Mapping_target | Y105E8B | |||||
Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (17) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539005215 | ||
History | Acquires_merge | WBVar01392814 | ||||
WBVar01399429 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00002978 | ||||
Transcript | Y105E8B.1s.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1s.1:c.241-1113del | |||||
Intron_number | 3/8 | |||||
Y105E8B.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1d.1:c.241-1113del | |||||
Intron_number | 4/11 | |||||
Y105E8B.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1g.1:c.241-1113del | |||||
Intron_number | 4/9 | |||||
Y105E8B.1o.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1o.1:c.241-1113del | |||||
Intron_number | 4/10 | |||||
Y105E8B.1q.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1q.1:c.241-1113del | |||||
Intron_number | 3/8 | |||||
Y105E8B.1p.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1p.1:c.241-1113del | |||||
Intron_number | 3/8 | |||||
Y105E8B.1r.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1r.1:c.241-1113del | |||||
Intron_number | 3/8 | |||||
Y105E8B.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1f.1:c.241-1113del | |||||
Intron_number | 4/10 | |||||
Y105E8B.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1a.1:c.241-1113del | |||||
Intron_number | 4/10 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |