WormBase Tree Display for Variation: WBVar01233910
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WBVar01233910 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01233910 | |||||
Other_name | cewivar00006693 | ||||||
F08D12.1.1:c.780T>C | |||||||
CE41557:p.Ile260= | |||||||
HGVSg | CHROMOSOME_II:g.2789580T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | F08D12 | |||
Flanking_sequences | CAAAAAATCCAATTTTTCAGTCATCCGGACTCTAGCGTCAAAGCAACCAT | ACCAACAATATTCCGGCGGCTTCTAGCGATTTTGCACTTCCAGAATCTCG | |||||
Mapping_target | F08D12 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (19) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539072463 | |||
History | Acquires_merge | WBVar01299834 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00017245 | |||||
Transcript | F08D12.1.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F08D12.1.1:c.780T>C | ||||||
HGVSp | CE41557:p.Ile260= | ||||||
cDNA_position | 781 | ||||||
CDS_position | 780 | ||||||
Protein_position | 260 | ||||||
Exon_number | 6/10 | ||||||
Codon_change | atT/atC | ||||||
Amino_acid_change | I | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |