WormBase Tree Display for Gene: WBGene00017245
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| WBGene00017245 | SMap | S_parent | Sequence | F08D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srpa-72 | Paper_evidence | WBPaper00045991 | |||||
| Person_evidence | WBPerson3188 | ||||||||
| Sequence_name | F08D12.1 | ||||||||
| Molecular_name | F08D12.1 | ||||||||
| F08D12.1.1 | |||||||||
| CE41557 | |||||||||
| Other_name | CELE_F08D12.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srpa-72 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Nov 2014 15:10:23 | WBPerson2970 | Name_change | CGC_name | srpa-72 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srpa | ||||||||
| Allele (194) | |||||||||
| Strain | WBStrain00051271 | ||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable 7S RNA binding activity. Predicted to contribute to ribosome binding activity. Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane. Predicted to be located in endoplasmic reticulum. Predicted to be part of signal recognition particle, endoplasmic reticulum targeting. Is an ortholog of human SRP72 (signal recognition particle 72). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0000159 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11303) | ||||
| Molecular_info | Corresponding_CDS | F08D12.1 | |||||||
| Corresponding_CDS_history | F08D12.1:wp182 | ||||||||
| Corresponding_transcript | F08D12.1.1 | ||||||||
| Other_sequence (55) | |||||||||
| Associated_feature | WBsf644025 | ||||||||
| WBsf987060 | |||||||||
| WBsf987061 | |||||||||
| WBsf1011772 | |||||||||
| WBsf220955 | |||||||||
| WBsf220956 | |||||||||
| Experimental_info | RNAi_result (42) | ||||||||
| Expr_pattern | Expr1012024 | ||||||||
| Expr1037406 | |||||||||
| Expr1147958 | |||||||||
| Expr2016609 | |||||||||
| Expr2034800 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (68) | |||||||||
| Map_info | Map | II | Position | -11.0126 | |||||
| Positive | Positive_clone | F08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027766 | ||||||||
| WBPaper00034672 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
