WormBase Tree Display for Variation: WBVar01232803
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WBVar01232803 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01232803 | |||||
Other_name | cewivar00085181 | ||||||
CE53955:p.Ser611Pro | |||||||
F42G2.4.1:c.1831T>C | |||||||
HGVSg | CHROMOSOME_II:g.2409831A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | F42G2 | |||
Flanking_sequences | ACGCTCTTGGTAATATCTGATTTGAAGATCCTCGTCAACATCAGCGTAGG | GAAAAACCAAATATTAGGTAGCCCTGACGAAGGATCGGAGACTCTGCGGG | |||||
Mapping_target | F42G2 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (33) | |||||||
Laboratory | AX | ||||||
Analysis (2) | |||||||
DB_info | Database | dbSNP_ss | ss | 539071467 | |||
History | Acquires_merge | WBVar01363738 | |||||
WBVar01298586 | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00018353 | |||||
Transcript | F42G2.4.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | F42G2.4.1:c.1831T>C | ||||||
HGVSp | CE53955:p.Ser611Pro | ||||||
cDNA_position | 1839 | ||||||
CDS_position | 1831 | ||||||
Protein_position | 611 | ||||||
Exon_number | 7/8 | ||||||
Codon_change | Tcc/Ccc | ||||||
Amino_acid_change | S/P | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |